How many 360 degree images do you have for the full virtual tour? Is it just a few or an enormous tour?
Back up your entire tour folder
'twice' before you start encrypting anything. Once I forgot to back it up and after encrypting all the code I needed to go back in at a later date to make adjustments only to see random characters. That was a crap day.
Here's a post that has plenty explained.
Did I mention to back up the entire tour folder first before evening starting up the krpano Protect Tool.exe
Send me a PM if you get stuck .